HL_3JBP_054
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- AUUUUUCU
- Length
- 8 nucleotides
- Bulged bases
- 3JBP|1|AA|U|668, 3JBP|1|AA|C|669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBP_054 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.2224
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JBP|1|AA|A|663
3JBP|1|AA|U|664
3JBP|1|AA|U|665
3JBP|1|AA|U|666
3JBP|1|AA|U|667
3JBP|1|AA|U|668
3JBP|1|AA|C|669
3JBP|1|AA|U|670
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AF
- 60S ribosomal protein uL4
- Chain AI
- 60S ribosomal protein eL6
Coloring options: