HL_3JBP_058

3D structure

PDB id

3JBP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GUGCCCCAC

Length

9 nucleotides

Bulged bases

3JBP|1|AA|C|856, 3JBP|1|AA|C|857

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBP|1|AA|G|833
3JBP|1|AA|U|834
3JBP|1|AA|G|835
3JBP|1|AA|C|856
3JBP|1|AA|C|857
3JBP|1|AA|C|858
3JBP|1|AA|C|859
3JBP|1|AA|A|860
3JBP|1|AA|C|861

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein uL4

Chain AS

60S ribosomal protein eL18