HL_3JBU_007

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAACUGAGACACGGUC

Length

16 nucleotides

Bulged bases

3JBU|1|A|C|330, 3JBU|1|A|G|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|319
3JBU|1|A|A|320
3JBU|1|A|A|321
3JBU|1|A|C|322
3JBU|1|A|U|323
3JBU|1|A|G|324
3JBU|1|A|A|325
3JBU|1|A|G|326
3JBU|1|A|A|327
3JBU|1|A|C|328
3JBU|1|A|A|329
3JBU|1|A|C|330
3JBU|1|A|G|331
3JBU|1|A|G|332
3JBU|1|A|U|333
3JBU|1|A|C|334

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20