HL_3JBU_059

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGGUGCUAACGUCC

Length

14 nucleotides

Bulged bases

3JBU|1|b|U|958, 3JBU|1|b|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|952
3JBU|1|b|G|953
3JBU|1|b|G|954
3JBU|1|b|U|955
3JBU|1|b|G|956
3JBU|1|b|C|957
3JBU|1|b|U|958
3JBU|1|b|A|959
3JBU|1|b|A|960
3JBU|1|b|C|961
3JBU|1|b|G|962
3JBU|1|b|U|963
3JBU|1|b|C|964
3JBU|1|b|C|965

Current chains

Chain b

23S rRNA

Nearby chains

Chain a

5S ribosomal RNA; 5S rRNA

Chain m

50S ribosomal protein L16