HL_3JBU_083
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 3JBU|1|b|A|2030, 3JBU|1|b|A|2031, 3JBU|1|b|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBU_083 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.2083
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
3JBU|1|b|G|2027
3JBU|1|b|U|2028
3JBU|1|b|G|2029
3JBU|1|b|A|2030
3JBU|1|b|A|2031
3JBU|1|b|G|2032
3JBU|1|b|A|2033
3JBU|1|b|U|2034
3JBU|1|b|G|2035
3JBU|1|b|C|2036
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain r
- 50S ribosomal protein L21
Coloring options: