HL_3JBU_096

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|C|2652
3JBU|1|b|U|2653
3JBU|1|b|A|2654
3JBU|1|b|G|2655
3JBU|1|b|U|2656
3JBU|1|b|A|2657
3JBU|1|b|C|2658
3JBU|1|b|G|2659
3JBU|1|b|A|2660
3JBU|1|b|G|2661
3JBU|1|b|A|2662
3JBU|1|b|G|2663
3JBU|1|b|G|2664
3JBU|1|b|A|2665
3JBU|1|b|C|2666
3JBU|1|b|C|2667
3JBU|1|b|G|2668

Current chains

Chain b

23S rRNA

Nearby chains

Chain g

50S ribosomal protein L6