HL_3JBU_107

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UUGCACAAUGGGCGCAAGCCUGAUGCA

Length

27 nucleotides

Bulged bases

3JBU|1|A|U|368, 3JBU|1|A|A|373, 3JBU|1|A|G|376, 3JBU|1|A|G|377, 3JBU|1|A|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|U|367
3JBU|1|A|U|368
3JBU|1|A|G|369
3JBU|1|A|C|370
3JBU|1|A|A|371
3JBU|1|A|C|372
3JBU|1|A|A|373
3JBU|1|A|A|374
3JBU|1|A|U|375
3JBU|1|A|G|376
3JBU|1|A|G|377
3JBU|1|A|G|378
3JBU|1|A|C|379
3JBU|1|A|G|380
3JBU|1|A|C|381
3JBU|1|A|A|382
3JBU|1|A|A|383
3JBU|1|A|G|384
3JBU|1|A|C|385
3JBU|1|A|C|386
3JBU|1|A|U|387
3JBU|1|A|G|388
3JBU|1|A|A|389
3JBU|1|A|U|390
3JBU|1|A|G|391
3JBU|1|A|C|392
3JBU|1|A|A|393

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16