HL_3JBU_108

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AAGUUAAUACCUU

Length

13 nucleotides

Bulged bases

3JBU|1|A|A|461, 3JBU|1|A|A|466, 3JBU|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|A|460
3JBU|1|A|A|461
3JBU|1|A|G|462
3JBU|1|A|U|463
3JBU|1|A|U|464
3JBU|1|A|A|465
3JBU|1|A|A|466
3JBU|1|A|U|467
3JBU|1|A|A|468
3JBU|1|A|C|469
3JBU|1|A|C|470
3JBU|1|A|U|471
3JBU|1|A|U|472

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16