HL_3JBU_112

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CGUGGAUCAGAAUGCCACG

Length

19 nucleotides

Bulged bases

3JBU|1|A|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|C|1352
3JBU|1|A|G|1353
3JBU|1|A|U|1354
3JBU|1|A|G|1355
3JBU|1|A|G|1356
3JBU|1|A|A|1357
3JBU|1|A|U|1358
3JBU|1|A|C|1359
3JBU|1|A|A|1360
3JBU|1|A|G|1361
3JBU|1|A|A|1362
3JBU|1|A|A|1363
3JBU|1|A|U|1364
3JBU|1|A|G|1365
3JBU|1|A|C|1366
3JBU|1|A|C|1367
3JBU|1|A|A|1368
3JBU|1|A|C|1369
3JBU|1|A|G|1370

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14