HL_3JBU_114

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UGUGUUUCGACACA

Length

14 nucleotides

Bulged bases

3JBU|1|b|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|U|133
3JBU|1|b|G|134
3JBU|1|b|U|135
3JBU|1|b|G|136
3JBU|1|b|U|137
3JBU|1|b|U|138
3JBU|1|b|U|139
3JBU|1|b|C|140
3JBU|1|b|G|141
3JBU|1|b|A|142
3JBU|1|b|C|143
3JBU|1|b|A|144
3JBU|1|b|C|145
3JBU|1|b|A|146

Current chains

Chain b

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23