HL_3JBU_130
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- UUUCGGCAAGGGGGUCAUCCCGACUUACCAACCCGAUG
- Length
- 38 nucleotides
- Bulged bases
- 3JBU|1|b|U|887, 3JBU|1|b|C|888, 3JBU|1|b|C|889, 3JBU|1|b|A|892, 3JBU|1|b|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBU|1|b|U|870
3JBU|1|b|U|871
3JBU|1|b|U|872
3JBU|1|b|C|873
3JBU|1|b|G|874
3JBU|1|b|G|875
3JBU|1|b|C|876
3JBU|1|b|A|877
3JBU|1|b|A|878
3JBU|1|b|G|879
3JBU|1|b|G|880
3JBU|1|b|G|881
3JBU|1|b|G|882
3JBU|1|b|G|883
3JBU|1|b|U|884
3JBU|1|b|C|885
3JBU|1|b|A|886
3JBU|1|b|U|887
3JBU|1|b|C|888
3JBU|1|b|C|889
3JBU|1|b|C|890
3JBU|1|b|G|891
3JBU|1|b|A|892
3JBU|1|b|C|893
3JBU|1|b|U|894
3JBU|1|b|U|895
3JBU|1|b|A|896
3JBU|1|b|C|897
3JBU|1|b|C|898
3JBU|1|b|A|899
3JBU|1|b|A|900
3JBU|1|b|C|901
3JBU|1|b|C|902
3JBU|1|b|C|903
3JBU|1|b|G|904
3JBU|1|b|A|905
3JBU|1|b|U|906
3JBU|1|b|G|907
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S13
- Chain m
- 50S ribosomal protein L16
Coloring options: