HL_3JBU_131

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AGCGACGCUUAUGCGUUGUU

Length

20 nucleotides

Bulged bases

3JBU|1|b|G|1171, 3JBU|1|b|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|A|1165
3JBU|1|b|G|1166
3JBU|1|b|C|1167
3JBU|1|b|G|1168
3JBU|1|b|A|1169
3JBU|1|b|C|1170
3JBU|1|b|G|1171
3JBU|1|b|C|1172
3JBU|1|b|U|1173
3JBU|1|b|U|1174
3JBU|1|b|A|1175
3JBU|1|b|U|1176
3JBU|1|b|G|1177
3JBU|1|b|C|1178
3JBU|1|b|G|1179
3JBU|1|b|U|1180
3JBU|1|b|U|1181
3JBU|1|b|G|1182
3JBU|1|b|U|1183
3JBU|1|b|U|1184

Current chains

Chain b

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30