HL_3JBV_005

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

3JBV|1|A|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JBV_005 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.456

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3JBV|1|A|C|207
3JBV|1|A|U|208
3JBV|1|A|U|209
3JBV|1|A|C|210
3JBV|1|A|G|211
3JBV|1|A|G|212

Current chains

Chain A

RNA (1530-MER)

Nearby chains