HL_3JBV_062

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

3JBV|1|b|A|781, 3JBV|1|b|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JBV_062 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.2647

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

3JBV|1|b|U|779
3JBV|1|b|G|780
3JBV|1|b|A|781
3JBV|1|b|A|782
3JBV|1|b|A|783
3JBV|1|b|G|784
3JBV|1|b|G|785

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain c

50S ribosomal protein L2