3D structure

PDB id
3JBV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Experimental method
ELECTRON MICROSCOPY
Resolution
3.32 Å

Loop

Sequence
CCUCGCG
Length
7 nucleotides
Bulged bases
3JBV|1|b|U|1729, 3JBV|1|b|C|1730, 3JBV|1|b|C|1732
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JBV|1|b|C|1727
3JBV|1|b|C|1728
3JBV|1|b|U|1729
3JBV|1|b|C|1730
3JBV|1|b|G|1731
3JBV|1|b|C|1732
3JBV|1|b|G|1733

Current chains

Chain b
RNA (2903-MER)

Nearby chains

No other chains within 10Å

Coloring options:

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