HL_3JBV_092
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 3JBV|1|b|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBV_092 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.1494
- The information below is about HL_7A0S_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
3JBV|1|b|C|2248
3JBV|1|b|U|2249
3JBV|1|b|G|2250
3JBV|1|b|G|2251
3JBV|1|b|G|2252
3JBV|1|b|G|2253
3JBV|1|b|C|2254
3JBV|1|b|G|2255
3JBV|1|b|G|2256
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain V
- Transfer RNA; tRNA
- Chain m
- 50S ribosomal protein L16
- Chain y
- 50S ribosomal protein L27
Coloring options: