HL_3JBV_099

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GGCUGAAGUAGGUC

Length

14 nucleotides

Bulged bases

3JBV|1|b|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|G|2525
3JBV|1|b|G|2526
3JBV|1|b|C|2527
3JBV|1|b|U|2528
3JBV|1|b|G|2529
3JBV|1|b|A|2530
3JBV|1|b|A|2531
3JBV|1|b|G|2532
3JBV|1|b|U|2533
3JBV|1|b|A|2534
3JBV|1|b|G|2535
3JBV|1|b|G|2536
3JBV|1|b|U|2537
3JBV|1|b|C|2538

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain 8

50S ribosomal protein L36

Chain g

50S ribosomal protein L5