HL_3JBV_128

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GUUGUCAUGCCAAUGGCACUGC

Length

22 nucleotides

Bulged bases

3JBV|1|b|C|2712, 3JBV|1|b|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|G|2694
3JBV|1|b|U|2695
3JBV|1|b|U|2696
3JBV|1|b|G|2697
3JBV|1|b|U|2698
3JBV|1|b|C|2699
3JBV|1|b|A|2700
3JBV|1|b|U|2701
3JBV|1|b|G|2702
3JBV|1|b|C|2703
3JBV|1|b|C|2704
3JBV|1|b|A|2705
3JBV|1|b|A|2706
3JBV|1|b|U|2707
3JBV|1|b|G|2708
3JBV|1|b|G|2709
3JBV|1|b|C|2710
3JBV|1|b|A|2711
3JBV|1|b|C|2712
3JBV|1|b|U|2713
3JBV|1|b|G|2714
3JBV|1|b|C|2715

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19