HL_3JCD_018
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GACACGUGGUAUC
- Length
- 13 nucleotides
- Bulged bases
- 3JCD|1|A|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCD_018 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.2585
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JCD|1|A|G|381
3JCD|1|A|A|382
3JCD|1|A|C|383
3JCD|1|A|A|384
3JCD|1|A|C|385
3JCD|1|A|G|386
3JCD|1|A|U|387
3JCD|1|A|G|388
3JCD|1|A|G|389
3JCD|1|A|U|390
3JCD|1|A|A|391
3JCD|1|A|U|392
3JCD|1|A|C|393
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- Transfer RNA; tRNA
- Chain X
- 50S ribosomal protein L28
Coloring options: