Motif HL_69139.1 Version HL_69139.1 of this group appears in releases 3.95 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 5-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8CRE_213 | 8CRE | 0.0000 | 0 | CM | SSU rRNA | U | 1040 | C | 1041 | U | 1042 | U | 1043 | U | 1044 | U | 1045 | A | 1046 | U | 1047 | U | 1048 | G | 1049 | ncWW | |
| 2 | HL_4WF9_013 | 4WF9 | 0.9212 | 3 | X | LSU rRNA | A | 427 | G | 428 | C | 429 | A | 430 | C | 431 | G | 434 | A | 436 | A | 437 | U | 438 | U | 439 | cWW | ntsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUUUAUUG | 1 |
| AGCACGUGAAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUUAUU | 1 |
| GCACGUGAAAU | 1 |
Release history
| Release | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: