3D structure

PDB id
3JCE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CCUUUUGUAUAAUG
Length
14 nucleotides
Bulged bases
3JCE|1|A|A|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCE|1|A|C|564
3JCE|1|A|C|565
3JCE|1|A|U|566
3JCE|1|A|U|567
3JCE|1|A|U|568
3JCE|1|A|U|569
3JCE|1|A|G|570
3JCE|1|A|U|571
3JCE|1|A|A|572
3JCE|1|A|U|573
3JCE|1|A|A|574
3JCE|1|A|A|575
3JCE|1|A|U|576
3JCE|1|A|G|577

Current chains

Chain A
23 ribosomal RNA

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain E
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21

Coloring options:

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