HL_3JCE_081
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 3JCE|1|a|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCE_081 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.0969
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JCE|1|a|U|12
3JCE|1|a|U|13
3JCE|1|a|U|14
3JCE|1|a|G|15
3JCE|1|a|A|16
3JCE|1|a|U|17
3JCE|1|a|C|18
3JCE|1|a|A|19
3JCE|1|a|U|20
3JCE|1|a|G|21
3JCE|1|a|G|22
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
Coloring options: