HL_3JCJ_053

3D structure

PDB id

3JCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUUGAUGGAAGUGUGGACGCCAGUCUGCAUGGCUUUAAUG

Length

41 nucleotides

Bulged bases

3JCJ|1|A|G|2133, 3JCJ|1|A|C|2145, 3JCJ|1|A|C|2146, 3JCJ|1|A|G|2157

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCJ|1|A|C|2103
3JCJ|1|A|C|2104
3JCJ|1|A|U|2105
3JCJ|1|A|U|2106
3JCJ|1|A|G|2107
3JCJ|1|A|A|2108
3JCJ|1|A|U|2109
3JCJ|1|A|G|2110
3JCJ|1|A|G|2133
3JCJ|1|A|A|2134
3JCJ|1|A|A|2135
3JCJ|1|A|G|2136
3JCJ|1|A|U|2137
3JCJ|1|A|G|2138
3JCJ|1|A|U|2139
3JCJ|1|A|G|2140
3JCJ|1|A|G|2141
3JCJ|1|A|A|2142
3JCJ|1|A|C|2143
3JCJ|1|A|G|2144
3JCJ|1|A|C|2145
3JCJ|1|A|C|2146
3JCJ|1|A|A|2147
3JCJ|1|A|G|2148
3JCJ|1|A|U|2149
3JCJ|1|A|C|2150
3JCJ|1|A|U|2151
3JCJ|1|A|G|2152
3JCJ|1|A|C|2153
3JCJ|1|A|A|2154
3JCJ|1|A|U|2155
3JCJ|1|A|G|2156
3JCJ|1|A|G|2157
3JCJ|1|A|C|2179
3JCJ|1|A|U|2180
3JCJ|1|A|U|2181
3JCJ|1|A|U|2182
3JCJ|1|A|A|2183
3JCJ|1|A|A|2184
3JCJ|1|A|U|2185
3JCJ|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains