HL_3JCN_079
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCN_079 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.1779
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JCN|1|a|A|320
3JCN|1|a|A|321
3JCN|1|a|C|322
3JCN|1|a|U|323
3JCN|1|a|G|324
3JCN|1|a|A|325
3JCN|1|a|G|326
3JCN|1|a|A|327
3JCN|1|a|C|328
3JCN|1|a|A|329
3JCN|1|a|C|330
3JCN|1|a|G|331
3JCN|1|a|G|332
3JCN|1|a|U|333
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain s
- 30S ribosomal protein S16
- Chain x
- 30S ribosomal protein S20
Coloring options: