HL_3JCN_110

3D structure

PDB id

3JCN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

3JCN|1|A|U|1729, 3JCN|1|A|C|1730, 3JCN|1|A|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JCN_110 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.3435

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

3JCN|1|A|C|1727
3JCN|1|A|C|1728
3JCN|1|A|U|1729
3JCN|1|A|C|1730
3JCN|1|A|G|1731
3JCN|1|A|C|1732
3JCN|1|A|G|1733

Current chains

Chain A

23S ribosomal RNA

Nearby chains