HL_3JCN_116

3D structure

PDB id

3JCN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGAUCAGAAUGCC

Length

13 nucleotides

Bulged bases

3JCN|1|a|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCN|1|a|G|1355
3JCN|1|a|G|1356
3JCN|1|a|A|1357
3JCN|1|a|U|1358
3JCN|1|a|C|1359
3JCN|1|a|A|1360
3JCN|1|a|G|1361
3JCN|1|a|A|1362
3JCN|1|a|A|1363
3JCN|1|a|U|1364
3JCN|1|a|G|1365
3JCN|1|a|C|1366
3JCN|1|a|C|1367

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain j

30S ribosomal protein S9

Chain m

30S ribosomal protein S10

Chain q

30S ribosomal protein S14