HL_3JCS_005
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUGCUGAAUACA
- Length
- 12 nucleotides
- Bulged bases
- 3JCS|1|1|G|216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|U|211
3JCS|1|1|U|212
3JCS|1|1|G|213
3JCS|1|1|C|214
3JCS|1|1|U|215
3JCS|1|1|G|216
3JCS|1|1|A|217
3JCS|1|1|A|218
3JCS|1|1|U|219
3JCS|1|1|A|220
3JCS|1|1|C|221
3JCS|1|1|A|222
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- 26S epsilon ribosomal RNA
- Chain 6
- 26S zeta ribosomal RNA
- Chain T
- ribosomal protein L22
- Chain g
- ribosomal protein L33e
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