HL_3JCS_015

3D structure

PDB id

3JCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

ACGUCAAAUCCGUU

Length

14 nucleotides

Bulged bases

3JCS|1|1|C|785

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCS|1|1|A|781
3JCS|1|1|C|782
3JCS|1|1|G|783
3JCS|1|1|U|784
3JCS|1|1|C|785
3JCS|1|1|A|786
3JCS|1|1|A|787
3JCS|1|1|A|788
3JCS|1|1|U|789
3JCS|1|1|C|790
3JCS|1|1|C|791
3JCS|1|1|G|792
3JCS|1|1|U|793
3JCS|1|1|U|794

Current chains

Chain 1

26S alpha ribosomal RNA

Nearby chains

Chain C

ribosomal protein L4

Chain P

ribosomal protein L18e

Chain c

ribosomal protein L30