HL_3JCS_042
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGGAACGGAC
- Length
- 10 nucleotides
- Bulged bases
- 3JCS|1|2|A|618, 3JCS|1|2|A|619, 3JCS|1|2|C|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90168.1
- Basepair signature
- cWW-R-R-tWH-R
- Number of instances in this motif group
- 14
Unit IDs
3JCS|1|2|G|615
3JCS|1|2|G|616
3JCS|1|2|G|617
3JCS|1|2|A|618
3JCS|1|2|A|619
3JCS|1|2|C|620
3JCS|1|2|G|621
3JCS|1|2|G|622
3JCS|1|2|A|623
3JCS|1|2|C|624
Current chains
- Chain 2
- 26S delta ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain B
- ribosomal protein L3
Coloring options: