HL_3KTV_004

3D structure

PDB id

3KTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the human SRP19/S-domain SRP RNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCUAAG

Length

6 nucleotides

Bulged bases

3KTV|1|C|C|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3KTV_004 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.3623

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

3KTV|1|C|C|169
3KTV|1|C|C|170
3KTV|1|C|U|171
3KTV|1|C|A|172
3KTV|1|C|A|173
3KTV|1|C|G|174

Current chains

Chain C

SRP RNA

Nearby chains