HL_3KTV_005

3D structure

PDB id

3KTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the human SRP19/S-domain SRP RNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3KTV_005 not in the Motif Atlas

Homologous match to HL_1MFQ_002

Geometric discrepancy: 0.1025

The information below is about HL_1MFQ_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

3KTV|1|C|G|197
3KTV|1|C|G|198
3KTV|1|C|A|199
3KTV|1|C|A|200
3KTV|1|C|A|201
3KTV|1|C|C|202

Current chains

Chain C

SRP RNA

Nearby chains

Chain D

Signal recognition particle 19 kDa protein