HL_3LWV_001
3D structure
- PDB id
- 3LWV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of H/ACA RNP bound to a substrate RNA containing 2'-deoxyuridine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- UGAUCAAUGAG
- Length
- 11 nucleotides
- Bulged bases
- 3LWV|1|D|U|26, 3LWV|1|D|C|27, 3LWV|1|D|U|30
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3LWV_001 not in the Motif Atlas
- Geometric match to HL_3HJW_001
- Geometric discrepancy: 0.0794
- The information below is about HL_3HJW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_18423.1
- Basepair signature
- cWW-tSH-tHS-F
- Number of instances in this motif group
- 1
Unit IDs
3LWV|1|D|U|23
3LWV|1|D|G|24
3LWV|1|D|A|25
3LWV|1|D|U|26
3LWV|1|D|C|27
3LWV|1|D|A|28
3LWV|1|D|A|29
3LWV|1|D|U|30
3LWV|1|D|G|31
3LWV|1|D|A|32
3LWV|1|D|G|33
Current chains
- Chain D
- H/ACA RNA
Nearby chains
- Chain B
- Ribosome biogenesis protein Nop10
- Chain C
- 50S ribosomal protein L7Ae
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