HL_3NPQ_001
3D structure
- PDB id
- 3NPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.18 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
3NPQ|1|A|C|20
3NPQ|1|A|G|21
3NPQ|1|A|A|22
3NPQ|1|A|G|23
3NPQ|1|A|A|24
3NPQ|1|A|G|25
Current chains
- Chain A
- S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Nearby chains
- Chain C
- S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Coloring options: