HL_3O58_068

3D structure

PDB id

3O58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

3O58|1|1|C|3115, 3O58|1|1|G|3116, 3O58|1|1|C|3120

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62578.1

Basepair signature

Not available

Number of instances in this motif group

4

Unit IDs

3O58|1|1|C|3110
3O58|1|1|U|3111
3O58|1|1|G|3112
3O58|1|1|A|3113
3O58|1|1|A|3114
3O58|1|1|C|3115
3O58|1|1|G|3116
3O58|1|1|C|3117
3O58|1|1|C|3118
3O58|1|1|U|3119
3O58|1|1|C|3120
3O58|1|1|U|3121
3O58|1|1|A|3122
3O58|1|1|A|3123
3O58|1|1|G|3124

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain I

60S ribosomal protein L9-A

Chain P

60S ribosomal protein L16-A