HL_3O58_075
3D structure
- PDB id
- 3O58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04325.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 3
Unit IDs
3O58|1|3|C|47
3O58|1|3|A|48
3O58|1|3|G|49
3O58|1|3|C|50
3O58|1|3|G|51
3O58|1|3|A|52
3O58|1|3|A|53
3O58|1|3|A|54
3O58|1|3|U|55
3O58|1|3|G|56
Current chains
- Chain 3
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- 60S ribosomal protein L25
- Chain c
- 60S ribosomal protein L35
- Chain d
- 60S ribosomal protein L37-A
- Chain e
- 60S ribosomal protein L39
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