HL_3OIN_001
3D structure
- PDB id
- 3OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Saccharomyces cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 1 molecule of cognate RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.9 Å
Loop
- Sequence
- CUUCAACG
- Length
- 8 nucleotides
- Bulged bases
- 3OIN|1|C|U|6, 3OIN|1|C|C|7
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97917.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3OIN|1|C|C|4
3OIN|1|C|U|5
3OIN|1|C|U|6
3OIN|1|C|C|7
3OIN|1|C|A|8
3OIN|1|C|A|9
3OIN|1|C|C|10
3OIN|1|C|G|11
Current chains
- Chain C
- 5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*AP*CP*GP*CP*CP*C)-3'
Nearby chains
- Chain A
- Ribosomal RNA small subunit methyltransferase NEP1
- Chain B
- Ribosomal RNA small subunit methyltransferase NEP1
Coloring options: