HL_3OKB_007

3D structure

PDB id

3OKB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a bacterial RNase P holoenzyme in complex with tRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

GUCGCUCCC*C

Length

10 nucleotides

Bulged bases

3OKB|1|B|U|243

QA status

Incomplete nucleotides: 242, 243, 244, 245, 246, 247, 248, 249, 251

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3OKB_007 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.1952

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

3OKB|1|B|G|242
3OKB|1|B|U|243
3OKB|1|B|C|244
3OKB|1|B|G|245
3OKB|1|B|C|246
3OKB|1|B|U|247
3OKB|1|B|C|248
3OKB|1|B|C|249
3OKB|1|B|C|251
*
3OKB|1|B|C|251

Current chains

Chain B

RNase P RNA

Nearby chains

Chain C

Transfer RNA; tRNA