HL_3OW2_012

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUGACAACC

Length

9 nucleotides

Bulged bases

3OW2|1|0|G|336, 3OW2|1|0|A|337, 3OW2|1|0|C|338

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3OW2_012 not in the Motif Atlas

Homologous match to HL_4V9F_012

Geometric discrepancy: 0.0371

The information below is about HL_4V9F_012

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

3OW2|1|0|G|334
3OW2|1|0|U|335
3OW2|1|0|G|336
3OW2|1|0|A|337
3OW2|1|0|C|338
3OW2|1|0|A|339
3OW2|1|0|A|340
3OW2|1|0|C|341
3OW2|1|0|C|342

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain S

50S ribosomal protein L24P

Chain X

50S ribosomal protein L32e