3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
GGAACAAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3OW2_029 not in the Motif Atlas
Homologous match to HL_4V9F_029
Geometric discrepancy: 0.0808
The information below is about HL_4V9F_029
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_42998.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

3OW2|1|0|G|1076
3OW2|1|0|G|1077
3OW2|1|0|A|1078
3OW2|1|0|A|1079
3OW2|1|0|C|1080
3OW2|1|0|A|1081
3OW2|1|0|A|1082
3OW2|1|0|C|1083

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 9
5S ribosomal RNA; 5S rRNA
Chain V
50S ribosomal protein L30P
Chain X
50S ribosomal protein L32e

Coloring options:


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