HL_3OW2_071

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

3OW2|1|9|C|3040

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3OW2_071 not in the Motif Atlas

Homologous match to HL_4V9F_071

Geometric discrepancy: 0.087

The information below is about HL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

3OW2|1|9|C|3037
3OW2|1|9|A|3038
3OW2|1|9|U|3039
3OW2|1|9|C|3040
3OW2|1|9|C|3041
3OW2|1|9|C|3042
3OW2|1|9|G|3043

Current chains

Chain 9

5S RIBOSOMAL RNA

Nearby chains

Chain 0

Large subunit ribosomal RNA; LSU rRNA

Chain D

50S ribosomal protein L5P

Chain M

50S ribosomal protein L18P