HL_3OWI_001

3D structure

PDB id

3OWI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the glycine riboswitch bound to glycine

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

GUUUAAUC

Length

8 nucleotides

Bulged bases

3OWI|1|A|U|18

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3OWI_001 not in the Motif Atlas

Homologous match to HL_3OXE_001

Geometric discrepancy: 0.099

The information below is about HL_3OXE_001

Detailed Annotation

Anticodon loop related

Broad Annotation

Anticodon loop

Motif group

HL_86621.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

3OWI|1|A|G|17
3OWI|1|A|U|18
3OWI|1|A|U|19
3OWI|1|A|U|20
3OWI|1|A|A|21
3OWI|1|A|A|22
3OWI|1|A|U|23
3OWI|1|A|C|24

Current chains

Chain A

Domain II of glycine riboswitch

Nearby chains