Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_3OWI_0011/A/17:24Anticodon loop related
homologous
HL_3OXE_001
HL_86621.1
HL_3OWI_0021/A/49:54GNRA related
homologous
HL_3OXE_002
HL_37569.2
HL_3OWI_0031/B/17:24No text annotation
HL_3OWI_0041/B/49:54No text annotation

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_3OWI_0011/A/12:14,
1/A/27:28
Single bulged A
homologous
IL_3OXE_001
IL_14190.2
IL_3OWI_0021/A/31:35,
1/A/70:72
No text annotation
homologous
IL_3OXE_002
IL_13785.1
IL_3OWI_0031/A/35:36,
1/A/68:70
Major groove platform
homologous
IL_3OXE_003
IL_48076.8
IL_3OWI_0041/A/38:42,
1/A/61:66
UAA/GAN with extra stack
homologous
IL_3OXE_004
IL_88131.1
IL_3OWI_0051/B/12:14,
1/B/27:28
Single bulged A
homologous
IL_3OXE_001
IL_14190.2
IL_3OWI_0061/B/31:35,
1/B/70:72
No text annotation
homologous
IL_3OXE_002
IL_13785.1
IL_3OWI_0071/B/35:36,
1/B/68:70
Major groove platform
homologous
IL_3OXE_003
IL_48076.8
IL_3OWI_0081/B/38:42,
1/B/61:66
UAA/GAN with extra stack
homologous
IL_3OXE_004
IL_88131.1

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_3OWI_0011/A/7:12,
1/A/28:29,
1/A/74:82
No text annotation
homologous
J3_3OXE_001
J3_58957.1
J3_3OWI_0021/B/7:12,
1/B/28:29,
1/B/74:82
No text annotation
homologous
J3_3OXE_001
J3_58957.1

Problematic loops

No problematic loops


Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.0788 s