HL_3P49_001

3D structure

PDB id

3P49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

CAUUGCACUCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35978.2

Basepair signature

cWW-R-R-R-R-R-R-R-R

Number of instances in this motif group

14

Unit IDs

3P49|1|A|C|722
3P49|1|A|A|723
3P49|1|A|U|724
3P49|1|A|U|725
3P49|1|A|G|726
3P49|1|A|C|727
3P49|1|A|A|728
3P49|1|A|C|729
3P49|1|A|U|730
3P49|1|A|C|731
3P49|1|A|C|732
3P49|1|A|G|733

Current chains

Chain A

GLYCINE RIBOSWITCH

Nearby chains

Chain B

U1 small nuclear ribonucleoprotein A