HL_3PIO_021
3D structure
- PDB id
- 3PIO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UGCUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 3PIO|1|X|U|760, 3PIO|1|X|A|764, 3PIO|1|X|C|765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3PIO_021 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.164
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
3PIO|1|X|U|757
3PIO|1|X|G|758
3PIO|1|X|C|759
3PIO|1|X|U|760
3PIO|1|X|G|761
3PIO|1|X|A|762
3PIO|1|X|A|763
3PIO|1|X|A|764
3PIO|1|X|C|765
3PIO|1|X|A|766
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain B
- 50S ribosomal protein L3
- Chain P
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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