HL_3PIO_027

3D structure

PDB id

3PIO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCACC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3PIO|1|X|G|1070
3PIO|1|X|U|1071
3PIO|1|X|U|1072
3PIO|1|X|G|1073
3PIO|1|X|G|1074
3PIO|1|X|C|1075
3PIO|1|X|U|1076
3PIO|1|X|U|1077
3PIO|1|X|A|1078
3PIO|1|X|G|1079
3PIO|1|X|A|1080
3PIO|1|X|A|1081
3PIO|1|X|G|1082
3PIO|1|X|C|1083
3PIO|1|X|A|1084
3PIO|1|X|G|1085
3PIO|1|X|C|1086
3PIO|1|X|C|1087
3PIO|1|X|A|1088
3PIO|1|X|C|1089
3PIO|1|X|C|1090

Current chains

Chain X

RIBOSOMAL 23S RNA

Nearby chains

Chain F

50S ribosomal protein L11

Chain J

50S ribosomal protein L16

Chain S

50S ribosomal protein L25