HL_3PIO_046

3D structure

PDB id

3PIO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

CGGUGCAAGCUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3PIO|1|X|C|1853
3PIO|1|X|G|1854
3PIO|1|X|G|1855
3PIO|1|X|U|1856
3PIO|1|X|G|1857
3PIO|1|X|C|1858
3PIO|1|X|A|1859
3PIO|1|X|A|1860
3PIO|1|X|G|1861
3PIO|1|X|C|1862
3PIO|1|X|U|1863
3PIO|1|X|G|1864

Current chains

Chain X

RIBOSOMAL 23S RNA

Nearby chains