HL_3PIO_068
3D structure
- PDB id
- 3PIO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- ACCCCACCCCAUGCCGAACUGGGUCGU
- Length
- 27 nucleotides
- Bulged bases
- 3PIO|1|Y|G|43
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3PIO|1|Y|A|31
3PIO|1|Y|C|32
3PIO|1|Y|C|33
3PIO|1|Y|C|34
3PIO|1|Y|C|35
3PIO|1|Y|A|36
3PIO|1|Y|C|37
3PIO|1|Y|C|38
3PIO|1|Y|C|39
3PIO|1|Y|C|40
3PIO|1|Y|A|41
3PIO|1|Y|U|42
3PIO|1|Y|G|43
3PIO|1|Y|C|44
3PIO|1|Y|C|45
3PIO|1|Y|G|46
3PIO|1|Y|A|47
3PIO|1|Y|A|48
3PIO|1|Y|C|49
3PIO|1|Y|U|50
3PIO|1|Y|G|51
3PIO|1|Y|G|52
3PIO|1|Y|G|53
3PIO|1|Y|U|54
3PIO|1|Y|C|55
3PIO|1|Y|G|56
3PIO|1|Y|U|57
Current chains
- Chain Y
- 5S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L5
- Chain L
- 50S ribosomal protein L18
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: