HL_3PIP_011
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UGUUCGUGAAACG
- Length
- 13 nucleotides
- Bulged bases
- 3PIP|1|X|G|399
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3PIP_011 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.3988
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3PIP|1|X|U|394
3PIP|1|X|G|395
3PIP|1|X|U|396
3PIP|1|X|U|397
3PIP|1|X|C|398
3PIP|1|X|G|399
3PIP|1|X|U|400
3PIP|1|X|G|401
3PIP|1|X|A|402
3PIP|1|X|A|403
3PIP|1|X|A|404
3PIP|1|X|C|405
3PIP|1|X|G|406
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain U
- 50S ribosomal protein L28
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