HL_3PYO_005
3D structure
- PDB id
- 3PYO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome. This file contains the 50S subunit of the first 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUUUUG
- Length
- 7 nucleotides
- Bulged bases
- 3PYO|1|A|U|162
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91907.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 5
Unit IDs
3PYO|1|A|C|155
3PYO|1|A|U|161
3PYO|1|A|U|162
3PYO|1|A|U|163
3PYO|1|A|U|164
3PYO|1|A|U|165
3PYO|1|A|G|171
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain X
- 50S ribosomal protein L28
Coloring options: