HL_3Q1R_005

3D structure

PDB id

3Q1R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a bacterial RNase P holoenzyme in complex with TRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

GGUAAGAGC

Length

9 nucleotides

Bulged bases

3Q1R|1|B|G|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3Q1R_005 not in the Motif Atlas

Geometric match to HL_1U9S_003

Geometric discrepancy: 0.1939

The information below is about HL_1U9S_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3Q1R|1|B|G|165
3Q1R|1|B|G|166
3Q1R|1|B|U|167
3Q1R|1|B|A|168
3Q1R|1|B|A|169
3Q1R|1|B|G|170
3Q1R|1|B|A|171
3Q1R|1|B|G|172
3Q1R|1|B|C|173

Current chains

Chain B

RNase P RNA

Nearby chains